YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LYPD3_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAARRGDTQ PVMWTTGWLL LLPLLLCEGA QALECYSCVQ KADDGCSPHR MKTVKCGPGV  60
   61 DVCTEAVGAV ETIHGQFSVA VRGCGSGIPG KNDRGLDLHG LLAFFQLQQC SEDRCNAKLN 120
  121 LTLRGLNPAG NESAYEPNGA ECYSCVGLSR EKCQGSMPPV VNCYNASGRV YKGCFDGNVT 180
  181 LTAANVTVSL PVRGCVQDET CTRDGVTGPG FTLSGSCCQG PRCNADLRNK TYFSPRIPPL 240
  241 VLLPPPTTAA PSTRAQNSSS TTSTAAPTTT TSIIKPTTAQ ASHTSPHEMD LEVIQEEGAS 300
  301 LSGGAAGHGG TAGHGGAAGH QDRSNMEKYP GKGGAQIPAK GGSGTLGSWL SAVLLTVVAG 360
  361 AML

Type	Start	End	Confidence
Signal Peptide	1	32	0.98
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	363	0.98