YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FAM3D_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVAGLIRVV VFIFTIVTMW VFLRSYTSFS RKTIRLPRWL GITPKDIQTP KSKCGLSKIC  60
   61 PNNFFAFKIS SGAANVVGPS MCFEDEIIMS PVRNNVGRGL NVALVNGSTG QVMKKDSFDM 120
  121 YSGDPQLLLN FLTEIPDSTL VLVASYDDPG TKMNDKIKTL FSNLGSSYAK QLGFRDSWVF 180
  181 VGAKDLKSKS PYEQFLKNNP ETNKYDGWPE LLELEGCVPR KVM

Type	Start	End	Confidence
Cytoplasmic	1	5	0.66
Transmembrane Helix	6	27	0.85
Non-Cytoplasmic	28	223	0.75