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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NID2_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRDPTAGWL TPPSPLSLLV MLLLLSRVGA LRPDELFPYG ESWGDQLLPE GDDESSAAVK  60
   61 LAIPLRFYDA QFSSLYVGTN GIISTQDFPR ETQYVDDDFP TDFPAIAPFL ADIDTSHSRG 120
  121 RILYREDTSG AVLSLAARYV RTGFPLSGSS FTPTHAFLAT WEHVGAYEEV SRGAAPSGEL 180
  181 NTFQAVLASD ESDTYAFFLY PANGLQFFGT RPKESYNVQL QLPARVGFCR GEADDLKREA 240
  241 LYFSLTNTEQ FVKNLYQLSN LGIPGVWAFH IGSRFALDNV RPATVGGDPS TARSSALEHP 300
  301 FSHAAALESY TEDSFHYYDE NEEDVEYPPV EPGEAPEGHS RIDVSFNSKA DPGLVDVGTS 360
  361 SPGSDRVSPW PYPAHGNWPS YRETEWASLD PQTKQGRPVG EGEVLDFRDP AELLDQMGTR 420
  421 APAPPEADAA LLTPVNEDLG GRNTQSYPEA GPVPSEPDVP VPPLEGEVLP HYPESGHVPP 480
  481 LRGGKYVIGL EDHVGFNDQV FTYNGANLET CEHSHGRCSQ HAFCTDYTTG FCCHCQSRFY 540
  541 GNGKHCLPEG APHRVNGKVS GRLRVGHIPV HFTDVDLHAY IVGNDGRAYT AISHVPQPAA 600
  601 QALLPVLPIG GLFGWLFALE KPGSENGFSL TGATFVHDVE VTFHPGEERV CITQTAEGLD 660
  661 PENYLSIKTN IEGQVPFIPA NFTAHITPYK EFYHYRDSVV TSSSSRSFSL TSGSINQTWS 720
  721 YHIDQNITYQ ACRHAPRHLA IPATQQLTVD RAFALYSEDE GVLRFAVTNQ IGPVEVDSAP 780
  781 VGVNPCYDGS HTCDTTARCH PGTGVDYTCE CTPGFQGDGR SCVDVNECAT GFHRCGPNSV 840
  841 CVNLVGSYRC ECRSGYEFAD DQHTCILIAP PPNPCFDGSH TCAPEGQARC IHHGGSSFSC 900
  901 ACLPGFIGTG HQCSDVDECA ENRCHEAAIC YNTPGSFSCR CQPGYRGDGF HCTSDTVPED 960
  961 SISGLKPCEY QQRYAQTQHA YPGSRIHIPQ CDDQGNFVPL QCHGSTGFCW CVDRNGHEVP1020
 1021 GTQTPPGSTP PHCGPPPEPT QRPRTVCERW RESLLEHYGG TPRDDQYVPQ CDDLGHFIPL1080
 1081 QCHGKSDFCW CVDKDGRELQ GTRSQPGTRP ACIPTVAPPV VRPTPRPDVT PPSVGTFLLY1140
 1141 AQGQQIGHLP FNGSRLQKDA ARTLLSLHGS IVVGIDYDCR ERMVYWTDVA GRTISRASLE1200
 1201 AGAEPETIIT SGLISPEGLA IDHFRRTMYW TDSGLDKIER AELDGSERKV LFHTDLVNPR1260
 1261 AITVDPIRGN LYWTDWNREA PKIETSSLDG ENRRILINKD IGLPNGLTFD PFSKLLCWAD1320
 1321 AGTKKLECTL PDGTGRRVIQ NHLNYPFSIV SYADHFYHTD WRRDGVISVN KDSGQFTDEF1380
 1381 LPEQRSHLYG ITAVYPYCPT GRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle