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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13876360, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAEARSSGL VSPWRTVGVL LLLAALTEAS TIIHYEILEE RERGFPVGNV VTDLGLDLGS  60
   61 LSARRLRVVS GASRRFFEVN WETGEMFVND RLDREELCGT LPSCTVTLEL VVENPLELFS 120
  121 AEVVVQDIND NNPSFPTGEM KLEISEALAP GTRFPLESAH DPDVGSNSLQ TYELSHNEYF 180
  181 ALRVQTREDG TKYAELVLER ALDWEREPSV QLVLTALDGG TPARSATLPI RITVLDANDN 240
  241 APAFNQSLYR ARVREDAPPG TRVAQVLATD LDEGLNGEIV YSFGSHNRAG VRELFALDLV 300
  301 TGVLTIKGRL DFEDTKLHEI YIQAKDKGAN PEGAHCKVLV EVVDVNDNAP EITVTSVYSP 360
  361 VPEDAPLGTV IALLSVTDLD AGENGLVTCE VPPGLPFSLT SSLKNYFTLK TSAALDRETM 420
  421 PEYNLSITAR DSGIPSLSAL TTVKVQVSDI NDNPPQSSQS SYDVYVEENN LPGVPILNLS 480
  481 VWDPDAPPNA RLSFFLLEPG AETGLVSRYF TINRDNGVLT TLVPLDYEDQ REFQLTAHIN 540
  541 DGGTPVLATN ISVNVFVTDR NDNAPQVLYP RPGQSSVEML PRGTAAGHVV SRVVGWDADA 600
  601 GHNAWLSYSL LGAPNQSLFA VGLHTGQIST ARPIQDTDSP RQILTVLISD SGEPLLSTTA 660
  661 TLTVSVTEES PEARAEFPSG SAPREQNKNL TFYLLLSLIL VSVGFAVTVL GVIIFKVYKW 720
  721 KRSRDLYRAP VSSLYRTPGP SLHADAVRGG LMPPHLYHQV YLTTDSRRSD PLLKKPGAAS 780
  781 PLASRQNTLR SCDPVFYRQV LGAESAPPGQ QAPPNTDWRF SQAQRPGTSG SQNGDETGTW 840
  841 PNNQFDTEML QAMILASASE AADGSSTLGG GAGTMGLSAR YGPQFTLQHV PDYRQNVYIP 900
  901 GSNATLTNAA GKRDGKAPAG GNGNKKKSGK KEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle