YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14328907
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRHSSYFFI WLQLELCAMA VLLTKEEIRC YCDAAHCVAT GYMCKSELSA CFSRLLDPQN  60
   61 TNSPLTHGCL DSLASTADIC RAKQAQNHSG PAMPTLECCH EDMCNYRGLH DVLSPPRGEA 120
  121 SGQGNRYQHD SSRNLITNMQ ELTSSKELWF RAAVIAVPIA GGLILVLLIM LALRMLRSEI 180
  181 KRLQDERQQM LSRLHYSFHG HHSKKGQVAK LDLECMVPVS GQENCCLTCD KMRQAELSNE 240
  241 KILSLVHWGM YSGHGKLEFI

Type	Start	End	Confidence
Non-Cytoplasmic	1	148	0.74
Transmembrane Helix	149	173	0.90
Cytoplasmic	174	260	0.76