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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13876284, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGQRQVFFL TILLLFWKSD SEAIRYSMPE EKESGYLVAN VAKDLGLRVE ELATRGAQIH  60
   61 YRGNKELLQM DAETGNLFLK EKLDREALCG ATEPCVLHFQ IILENPVQFF QTELQLTDIN 120
  121 DHSPEFSDTE MLLTIPENAQ PGTVFPLKAA HDSDIGSNAV QNYTVNPNIH FHVVTLSRSD 180
  181 GRKYPELVLD RALDREEQPE LTLTLTALDG GSPPRSGTTE VHIEVVDIND NAPQFIQSLY 240
  241 EVQVPENSPL NALVVMVSAT DLDAGIYGNV AYSLFQGDGL SQPFVIDKIT GEIRLTKELD 300
  301 FEVSHHYTIE IAATDGGGLS GKCTVVIQVL DVNDNAPELA IRKLTVPVPE NSAETVVAVF 360
  361 SVSDSDSGDN GRIVCSIQNN IPFLLKPTFE NYYTLVTEGP LDRESRAEYN ITITVWDLGT 420
  421 PRLTTQHTIT VQVADINDNA PAFTQTSYTL FVQENNSPAL HIGTISATDS DSGSNAHITY 480
  481 SLLPPHDSQL ALASLVSINS DNGQLFALRA MDYEMLQAFE LHVDATDGGS PALSSQALVR 540
  541 VVVLDDNDNS PFVLYPMQNA SAPCTELLPR AAEPGYLITK VVAVDRDSGQ NAWLSFQLLK 600
  601 ATEPGLFSVW AHNGEVRTTR LLSERDAPKH KLLLLVKDNG DPPRSASVTL HVLVVDGFSQ 660
  661 PYLPLPEVAR DSTQDDYDVL TLYLVVALAS VSSLFLLSVL LFVGVRLCRR ARAASLGDYS 720
  721 VPEGHFPSHL VDVSRAGTLS QSYQYEVCLN GGTGTNEFNF LKPLFPILPT QAAAEERENA 780
  781 VVRNSVEFY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle