YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLP2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSERLSAP GCWLACTSFS RTKKGILLFA EIILCLVILI CFSASTTSAY SSLSVIEMIC  60
   61 AAVLLVFYTC DLHSKISFIN WPWTDFFRSL IATILYLITS IVVLVEGRGS SRVVAGILGL 120
  121 LATLLFGYDA YITFPLKQQR HTAAPTDPTD GP

Type	Start	End	Confidence
Cytoplasmic	1	24	0.96
Transmembrane Helix	25	46	0.90
Non-Cytoplasmic	47	52	0.69
Transmembrane Helix	53	72	0.84
Cytoplasmic	73	85	0.75
Transmembrane Helix	86	105	0.95
Non-Cytoplasmic	106	112	0.72
Transmembrane Helix	113	132	0.95
Cytoplasmic	133	152	0.83