YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEMO_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTAVALNI LVLLGLCWSL AVASPLPTAH GRVAEVENGT KPDSDVPEHC LDTWSFDAAT  60
   61 MDHNGTMLFF KGEFVWRGHS GTRELISARW KNPITSVDAA FRGPDSVFLI KEDKVWVYPP 120
  121 EKKENGYPKL FQEEFPGIPY PPDAAVECHR GECQSEGVLF FQGNRKWFWD FATRTQKERS 180
  181 WSTVGNCTAA LRWLERYYCF QGNKFLRFNP VTGEVPPRYP LDARDYFVSC PGRGHGRPRN 240
  241 GTAHGNSTHP MHSRCSPDPG LTALLSDHRG ATYAFTGSHY WRLDSSRDGW HSWPIAHHWP 300
  301 QGPSTVDAAF SWDDKVYLIQ GTQVYVFLTK GGNNLVSGYP KRLEKELGSP PGISLETIDA 360
  361 AFSCPGSSRL YVSSGRRLWW LDLKSGAQAT WTEVSWPHEK VDGALCLDKS LGPNTCSSNG 420
  421 SSLYFIHGPN LYCYSSIDKL NAAKSLPQPQ KVNSILGCSQ

Type	Start	End	Confidence
Signal Peptide	1	31	0.95
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	460	0.99