YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SLT2_MOUSE, SLIT...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIGWQTLS LSLGLVLSIL NKVAPQACPA QCSCSGSTVD CHGLALRSVP RNIPRNTERL  60
   61 DLNGNNITRI TKTDFAGLRH LRVLQLMENR ISTIERGAFQ DLKELERLRL NRNNLQLFPE 120
  121 LLFLGTAKLY RLDLSENQIQ AIPRKAFRGA VDIKNLQLDY NQISCIEDGA FRALRDLEVL 180
  181 TLNNNNITRL SVASFNHMPK LRTFRLHSNN LYCDCHLAWL SDWLRQRPRV GLYTQCMGPS 240
  241 HLRGHNVAEV QKREFVCSGH QSFMAPSCSV LHCPAACTCS NNIVDCRGKG LTEIPTNLPE 300
  301 TITEIRLEQN SIRVIPPGAF SPYKKLRRLD LSNNQISELA PDAFQGLRSL NSLVLYGNKI 360
  361 TELPKSLFEG LFSLQLLLLN ANKINCLRVD AFQDLHNLNL LSLYDNKLQT VAKGTFSALR 420
  421 AIQTMHLAQN PFICDCHLKW LADYLHTNPI ETSGARCTSP RRLANKRIGQ IKSKKFRCSG 480
  481 TEDYRSKLSG DCFADLACPE KCRCEGTTVD CSNQRLNKIP DHIPQYTAEL RLNNNEFTVL 540
  541 EATGIFKKLP QLRKINFSNN KITDIEEGAF EGASGVNEIL LTSNRLENVQ HKMFKGLESL 600
  601 KTLMLRSNRI SCVGNDSFIG LGSVRLLSLY DNQITTVAPG AFDSLHSLST LNLLANPFNC 660
  661 NCHLAWLGEW LRRKRIVTGN PRCQKPYFLK EIPIQDVAIQ DFTCDDGNDD NSCSPLSRCP 720
  721 SECTCLDTVV RCSNKGLKVL PKGIPKDVTE LYLDGNQFTL VPKELSNYKH LTLIDLSNNR 780
  781 ISTLSNQSFS NMTQLLTLIL SYNRLRCIPP RTFDGLKSLR LLSLHGNDIS VVPEGAFNDL 840
  841 SALSHLAIGA NPLYCDCNMQ WLSDWVKSEY KEPGIARCAG PGEMADKLLL TTPSKKFTCQ 900
  901 GPVDITIQAK CNPCLSNPCK NDGTCNNDPV DFYRCTCPYG FKGQDCDVPI HACISNPCKH 960
  961 GGTCHLKEGE NAGFWCTCAD GFEGENCEVN IDDCEDNDCE NNSTCVDGIN NYTCLCPPEY1020
 1021 TGELCEEKLD FCAQDLNPCQ HDSKCILTPK GFKCDCTPGY IGEHCDIDFD DCQDNKCKNG1080
 1081 AHCTDAVNGY TCVCPEGYSG LFCEFSPPMV LPRTSPCDNF DCQNGAQCII RINEPICQCL1140
 1141 PGYLGEKCEK LVSVNFVNKE SYLQIPSAKV RPQTNITLQI ATDEDSGILL YKGDKDHIAV1200
 1201 ELYRGRVRAS YDTGSHPASA IYSVETINDG NFHIVELLTL DSSLSLSVDG GSPKVITNLS1260
 1261 KQSTLNFDSP LYVGGMPGKN NVASLRQAPG QNGTSFHGCI RNLYINSELQ DFRKMPMQTG1320
 1321 ILPGCEPCHK KVCAHGMCQP SSQSGFTCEC EEGWMGPLCD QRTNDPCLGN KCVHGTCLPI1380
 1381 NAFSYSCKCL EGHGGVLCDE EEDLFNPCQM IKCKHGKCRL SGVGQPYCEC NSGFTGDSCD1440
 1441 REISCRGERI RDYYQKQQGY AACQTTKKVS RLECRGGCAG GQCCGPLRSK RRKYSFECTD1500
 1501 GSSFVDEVEK VVKCGCARCA S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle