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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-25
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLLLKI STFVDSFQIG HLEFENSNET RILEICMKNA GSWRDHRLIS LPSCHNFNGL  60
   61 ENAANLNYQY SVDLLIGAAC DEETQTVSRL ALRWHKLYLS SAPLSTKEKE STTIALKPHS 120
  121 LAGTAEVILA MCKSMKWKEI GIIYSEETKY TAHAIYDMLA EQEDDLKINV FLETDGLSNT 180
  181 YTILHSARAL ISFLTTLDLS KFFKTLKENA FRPLEFSIVH VDCNKSEISN FYTYLDNNAG 240
  241 EEPNPISAAR LRKLYRHVAL LKNSHDDMEK TEEFAKKYGL PSYTLYKALI LCDGLQLLNN 300
  301 YTAPRGNLSI VQQLPYLWNH VTNTETQGYS GPVFIGNDGV RLPYYEMHMW RDGKAVHVAN 360
  361 VKPRESDYCG GNMTKNCYEF LPSSPLLEDL PPYTSDCGYD NNLCSDFHVF MIAAIVFSIL 420
  421 LIPMAIAFYL QRKEHLIQQM PWRVPLDSIS FDDNGGSLSA SRRVSTISTA RASYSSIFSG 480
  481 NVAEHAIVNK QKVSVKRHVQ RRAITFSRQE MEMLNQLKYM SHTNINPFTG ICFNQGSELI 540
  541 VMWQFTTRYS LEDLIFVKEQ KFGRNFQSTF IKHIVHGINY IHNSSIKVHG ALYLSNCVVD 600
  601 SYWVVKLTDF GIKGILKERT NHKELAPSSA FDVDAIHYKY LQLAPEHISA ILEKLEEPRG 660
  661 TVEGDIYQLA MCIYQILFYM RPFAERQESI KVYSGEIFLK LPELAHLLSS QSTAPLHPKV 720
  721 PEGNSFTMRL LSIIQQCWLY KPAARPALIK ITDAVNREFG QDVKGTLIDQ MIEMIDEYSA 780
  781 NLEQIVAERT RELEQDMSVT ENLLYQLLPK SVADSIRSGK TVVPEQHSSV TLLVVDVCQF 840
  841 TKFCEAFIPV HILETLQELY SSFDNIVQKN KAFKVENVGD AYLICSGIPE MSGFRHLREI 900
  901 CKISLKLQAF MKTFKVRHRP SHTLQIKMGI TSGAVAAGIL GSTAPRFCIF GDTVNMACRM 960
  961 ASTGNPGSIQ LSELTANTLM EKFPSFMLEE RGMIDVKGKG ACLTFWLTGE KDIMRRQSSR1020
 1021 SSCISQIKFE LDEADNSKKM FLNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle