YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|123228999, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHVKWPFP AVPRLTWTLA SSVVMGLVGT YSCFWTKYMN HLTVHNKEVL YELIENRGPA  60
   61 TPLITVSNHQ SCMDDPHLWG ILKLRHIWNL KLMRWTPAAA DICFTKELHS HFFSLGKCVP 120
  121 VCRGDGVYQK GMDFILEKLN HGDWVHIFPE GKVNMSSEFL RFKWGIGRLI AECHLNPIIL 180
  181 PLWHVGMNDV LPNSPPYFPR FGQKITVLIG KPFSTLPVLE RLRAENKSAV EMRKALTDFI 240
  241 QEEFQRLKMQ AEQLHNHFQP GR

Type	Start	End	Confidence
Signal Peptide	1	32	0.41
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	262	0.67