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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHST3_MOUSE
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGLALPQD FRDLVHSLKI RGRYVLFLAF VVIVFIFIEK ENKIISRVSD KLKQIPHFVA  60
   61 DANSTDPALL LSENASLLSL SELDSTFSHL RSRLHNLSLQ LGVEPAMESQ EAGAEKPSQQ 120
  121 AGAGTRRHVL LMATTRTGSS FVGEFFNQQG NIFYLFEPLW HIERTVFFQQ RGASAAGSAL 180
  181 VYRDVLKQLL LCDLYVLEPF ISPPPEDHLT QFLFRRGSSR SLCEDPVCTP FVKKVFEKYH 240
  241 CRNRRCGPLN VTLAGEACRR KDHVALKAVR IRQLEFLQPL VEDPRLDLRV IQLVRDPRAV 300
  301 LASRIVAFAG KYENWKKWLS EGQDQLSEDE VQRLRGNCES IRLSAELGLR QPAWLRGRYM 360
  361 LVRYEDVARR PLQKAREMYS FAGIPLTPQV EDWIQKNTQA TRDSSDVYST QKNSSEQFEK 420
  421 WRFSMPFKLA QVVQAACGPT MHLFGYKLAR DAASLTNRSI SLLEERGTFW VT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle