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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21450183, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLIRMGTQ ERRLLRPKRL HWSRLLFLLG MLIIGSTYQH LRRPQNPPSM WTKVSSQQPI  60
   61 KLAVRDLPNN EMAVAGSDPP EASSEVEDGM LAAQDTVIMD EAAPSIAMED TPNPPRTTKI 120
  121 PPASLKNSYS PTTAGTRRQK ENIPPTPSGA PSHFISTPGR QRVKSYIPKP RGERKNSSPT 180
  181 HAREKGRTHT PSPAGAHTIS PTATVRDRET MATYRLLETR FERTAGETTA ASLKRMVLNT 240
  241 PTFLTHEVET NLMTSSSLVG KNTAVSLRKG ERNISTTPQG AVPQHTPATS EEQMTVSTRM 300
  301 GSIPATIEGS TAARRINNPL SRTSAPAIRI ASATNREKRP STAPSTLVTP KATMSTQVHR 360
  361 CVVVEPAPAV PMTPSPGVTS ILFPETPSSG PSALPPGWPN LHPKAEYPPD LFSVEDRRQG 420
  421 WVVLHIFGMM YVFVALAIVC DEYFVPALGV ITHKLQISED VAGATFMAAG GSAPELFTSL 480
  481 IGVFISHSNV GIGTIVGSAV FNILFVIGTC ALFSREILNL TWWPLFRDVS FYILDLSMLI 540
  541 VFFLDSFIAW WESLLLLLAY ALYVFTMKWN KQIELWVKEQ LSRRPVAKVM ALGDLSKPSE 600
  601 DAVEENEQQD SKKLKLPSVL TRGSSSASLH NSIIRNTIYH LMLHSLDPLG EARPSKDKQE 660
  661 SLNQEARVLS QTKAESSPDE DEPAELPAVT VTPAPAPDAK GDQEDDPGCQ EDVDEAERRG 720
  721 EMTGEEGEKE TETEGKKDEQ EGETEAERKE DEQEEETEAE GKEQEGETEA EGKEDEQEGE 780
  781 TEAEGKKDEQ EGETEAEGKE EQEGETEAEG KEDEQEGETE AEGKEEQEGE TEAESKEVEQ 840
  841 ERETEAEGKD KHEGQGETQP DDTEVKDGEG ETEANAEDQC EATQGEKGAD GGGESDGGDS 900
  901 EEEEDEEDEE EEEEEDEEEE EEENEEPLSL EWPDSRQKQA IYLFLLPIVF PLWLTIPDVR 960
  961 RQESRKFFVI TFLGSIIWIA MFSYLMVWWA HQVGETIGIS EEIMGLTILA AGTSIPDLIT1020
 1021 SVIVARKGLG DMAVSSSVGS NIFDITVGLP VPWLLFSLIN ALQPVPVSSN GLFCAIVLLF1080
 1081 LMLLFVIFSI ASCKWRMNKI LGFTMFLLYF VFLVISVMLE DRIISCPVSV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle