YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPU1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEADGRFK GLLVPILLPE KCYDQLFVQW DLLHVPCLKI LLSKGLGLGI VAGSLLVKLP  60
   61 QVFKLLGAKS AEGLSLQSVM LELVALTGTV VYSITNNFPF SSWGEALFLT LQTVAICFLV 120
  121 MHYRGETVKG VAFLACYAMV LLALLSPLTP LAVVTLLQAS NVPAVVVGKL LQAATNYRNG 180
  181 HTGQLSAITV FMLFGGSLAR IFTSVQETGD PLMAGVFVVS SLCNGLIAAQ VLFYWNAKAP 240
  241 HKQKKEQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.51
Transmembrane Helix	40	57	0.66
Cytoplasmic	58	72	0.73
Transmembrane Helix	73	95	0.78
Non-Cytoplasmic	96	102	0.75
Transmembrane Helix	103	123	0.89
Cytoplasmic	124	129	0.79
Transmembrane Helix	130	153	0.83
Non-Cytoplasmic	154	154	0.37
Transmembrane Helix	155	173	0.45
Cytoplasmic	174	181	0.42
Transmembrane Helix	182	203	0.84
Non-Cytoplasmic	204	211	0.52
Transmembrane Helix	212	235	0.89
Cytoplasmic	236	247	0.57