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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLR1_MOUSE, CELR...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSSPRVLP ALVLLAAAAL PALELGAAAW ELRVPGGARA FALGPGWSYR LDTTRTPREL  60
   61 LDVSREGPAA GRRLGLGAGT LGCARLAGRL LPLQVRLVAR GAPTAPSLVL RARAYGARCG 120
  121 VRLLRRSARG AELRSPAVRS VPGLGDALCF PAAGGGAASL TSVLEAITNF PACSCPPVAG 180
  181 TGCRRGPICL RPGGSAELRL VCALGRAAGA VWVELVIQAT SGTPSESPSV SPSLLNLSQP 240
  241 RAGVVRRSRR GTGSSTSPQF PLPSYQVSVP ENEPAGTAVI ELRAHDPDEG DAGRLSYQME 300
  301 ALFDERSNGY FLIDAATGAV TTARSLDRET KDTHVLKVSA VDHGSPRRSA ATYLTVTVSD 360
  361 TNDHSPVFEQ SEYRERIREN LEVGYEVLTI RATDGDAPSN ANMRYRLLEG AGGVFEIDAR 420
  421 SGVVRTRAVV DREEAAEYQL LVEANDQGRN PGPLSASATV HIVVEDENDN YPQFSEKRYV 480
  481 VQVPEDVAVN TAVLRVQATD RDQGQNAAIH YSIVSGNLKG QFYLHSLSGS LDVINPLDFE 540
  541 AIREYTLRIK AQDGGRPPLI NSSGLVSVQV LDVNDNAPIF VSSPFQAAVL ENVPLGHSVL 600
  601 HIQAVDADAG ENARLQYRLV DTASTIVGGS SVDSENPASA PDFPFQIHNS SGWITVCAEL 660
  661 DREEVEHYSF GVEAVDHGSP AMSSSASVSI TVLDVNDNDP MFTQPVYELR LNEDAAVGSS 720
  721 VLTLRARDRD ANSVITYQLT GGNTRNRFAL SSQSGGGLIT LALPLDYKQE RQYVLAVTAS 780
  781 DGTRSHTAQV FINVTDANTH RPVFQSSHYT VSVSEDRPVG TSIATISATD EDTGENARIT 840
  841 YVLEDPVPQF RIDPDTGTIY TMTELDYEDQ AAYTLAITAQ DNGIPQKSDT TSLEILILDA 900
  901 NDNAPRFLRD FYQGSVFEDA PPSTSVLQVS ATDRDSGPNG RLLYTFQGGD DGDGDFYIEP 960
  961 TSGVIRTQRR LDRENVAVYN LWALAVDRGS PNPLSASVGI QVSVLDINDN PPVFEKDELE1020
 1021 LFVEENSPVG SVVARIRAND PDEGPNAQII YQIVEGNVPE VFQLDLLSGD LRALVELDFE1080
 1081 VRRDYMLVVQ ATSAPLVSRA TVHIRLLDQN DNPPELPDFQ ILFNNYVTNK SNSFPSGVIG1140
 1141 RIPAHDPDLS DSLNYTFLQG NELSLLLLDP ATGELQLSRD LDNNRPLEAL MEVSVSDGIH1200
 1201 SVTALCTLRV TIITDDMLTN SITVRLENMS QEKFLSPLLS LFVEGVATVL STTKDDIFVF1260
 1261 NIQNDTDVSS NILNVTFSAL LPGGTRGRFF PSEDLQEQIY LNRTLLTTIS AQRVLPFDDN1320
 1321 ICLREPCENY MKCVSVLRFD SSAPFISSTT VLFRPIHPIT GLRCRCPPGF TGDYCETEID1380
 1381 LCYSNPCGAN GRCRSREGGY TCECFEDFTG EHCQVNVRSG RCASGVCKNG GTCVNLLIGG1440
 1441 FHCVCPPGEY EHPYCEVSTR SFPPQSFVTF RGLRQRFHFT VSLAFATQDR NALLLYNGRF1500
 1501 NEKHDFIALE IVEEQLQLTF SAGETTTTVT PQVPGGVSDG RWHSVLVQYY NKPNIGHLGL1560
 1561 PHGPSGEKVA VVTVDDCDAA VAVHFGSYVG NYSCAAQGTQ SGSKKSLDLT GPLLLGGVPN1620
 1621 LPEDFPVHSR QFVGCMRNLS IDGRIVDMAA FIANNGTRAG CASQRNFCDG TSCQNGGTCV1680
 1681 NRWNTYLCEC PLRFGGKNCE QAMPHPQRFT GESVVLWSDL DITISVPWYL GLMFRTRKED1740
 1741 GVLMEATAGT SSRLHLQILN SYIRFEVSYG PSDVASMQLS KSRITDGGWH HLLIELRSAK1800
 1801 EGKDIKYLAV MTLDYGMDQS TVQIGNQLPG LKMRTIVIGG VTEDKVSVRH GFRGCMQGVR1860
 1861 MGETSTNIAT LNMNDALKVR VKDGCDVEDP CASSPCPPHR PCRDTWDSYS CICDRGYFGK1920
 1921 KCVDACLLNP CKHVAACVRS PNTPRGYSCE CGPGHYGQYC ENKVDLPCPK GWWGNPVCGP1980
 1981 CHCAVSQGFD PDCNKTNGQC QCKENYYKPP AQDACLPCDC FPHGSHSRAC DMDTGQCACK2040
 2041 PGVIGRQCNR CDNPFAEVTS LGCEVIYNGC PRAFEAGIWW PQTKFGQPAA VPCPKGSVGN2100
 2101 AVRHCSGEKG WLPPELFNCT SGSFVDLKAL NEKLNRNETR MDGNRSLRLA KALRNATQGN2160
 2161 STLFGNDVRT AYQLLARILQ HESRQQGFDL AATREANFHE DVVHTGSALL APATEASWEQ2220
 2221 IQRSEAGAAQ LLRHFEAYFS NVARNVKRTY LRPFVIVTAN MILAVDIFDK LNFTGAQVPR2280
 2281 FEDIQEELPR ELESSVSFPA DTFKPPEKKE GPVVRLTNRR TTPLTAQPEP RAERETSSSR2340
 2341 RRRHPDEPGQ FAVALVVIYR TLGQLLPEHY DPDHRSLRLP NRPVINTPVV SAMVYSEGTP2400
 2401 LPSSLQRPIL VEFSLLETEE RSKPVCVFWN HSLDTGGTGG WSAKGCELLS RNRTHVTCQC2460
 2461 SHSASCAVLM DISRREHGEV LPLKIITYAA LSLSLVALLV AFVLLSLVRT LRSNLHSIHK2520
 2521 NLIAALFFSQ LIFMVGINQT ENPFLCTVVA ILLHYVSMGT FAWTLVENLH VYRMLTEVRN2580
 2581 IDTGPMRFYH VVGWGIPAIV TGLAVGLDPQ GYGNPDFCWL SLQDTLIWSF AGPVGTVIII2640
 2641 NTVIFVLSAK VSCQRKHHYY ERKGVVSMLR TAFLLLLLVT ATWLLGLLAV NSDTLSFHYL2700
 2701 FAAFSCLQGI FVLLFHCVAH REVRKHLRAV LAGKKLQLDD SATTRATLLT RSLNCNNTYS2760
 2761 EGPDMLRTAL GESTASLDST TRDEGVQKLS VSSGPARGNH GEPDTSFIPR NSKKAHGPDS2820
 2821 DSDSELSLDE HSSSYASSHT SDSEDDGGEA EDKWNPAGGP AHSTPKADAL ANHVPAGWPD2880
 2881 ESLAGSDSEE LDTEPHLKVE TKVSVELHRQ AQGNHCGDRP SDPESGVLAK PVAVLSSQPQ2940
 2941 EQRKGILKNK VTYPPPLPEQ PLKSRLREKL ADCEQSPTSS RTSSLGSGDG VHATDCVITI3000
 3001 KTPRREPGRE HLNGVAMNVR TGSAQANGSD SEKP

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