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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EDEM1_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRALVLGL VLLRLGLHAV LWLVFGLGPS MGFYQRFPLS FGFQRLRDPD GSGPVGPPGG  60
   61 PAWLHRPRRG TEGRLETPPE PGPTPGPGVC GPAHWGYALG GGGCGPDEYE RRYSGAFPPQ 120
  121 LRAQMRDLAR GMFVFGYDNY MAHAFPQDEL NPIYCRGRGP DRGDPSNLNI NDVLGNYSLT 180
  181 LVDALDTLAI MGNSSEFQKA VKLVINTVSF DKDSTVQVFE ATIRVLGSLL SAHRIITDSK 240
  241 QPFGDMTIED YDNELLYMAH DLAVRLLPAF ENTKTGIPYP RVNLKTGVPP DSNNETCTAG 300
  301 AGSLLVEFGI LSRLLGDSTF EWVARRAVKA LWNLRSNDTG LLGNVVNIQT GHWVGKQSGL 360
  361 GAGLDSFYEY LLKSYILFGE KEDLEMFNAA YQSIQSYLRR GREACNEGEG DPPLYVNVNM 420
  421 FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA ICLHAFYYAI WKRYGALPER YNWQLQAPDV 480
  481 LFYPLRPELV ESTYLLYQAT KNPFYLHVGM DILQSLEKYT KVKCGYATLH HVIDKSKEDR 540
  541 MESFFLSETC KYLYLLFDEE NPVHKSGTRY MFTTEGHIIS VDKRLRELPW KEFFSEDGER 600
  601 DQEEKFVHRP KSQELRVINS SSNCNRVPDE RRYSLPLKSI YMRQIDQMVG LI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle