YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX14_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSEQAEQP NQPSSPPGSE NVVPREPLIA TAVKFLQNSR VRQSPLATRR AFLKKKGLTD  60
   61 EEIDLAFQQS GTAADEPSPL GPATPVVPVQ PPHLTPQPYS PRGSRWRDYG ALAIIMAGIA 120
  121 FGFHQLYKRY LLPLILGGRE DRKQLERMAA SLSELSGTVA QTVTQVQTTL ASVQELLRQQ 180
  181 QQKVQELAHE LATAKATTST NWILESQNIN ELKSEINSLK GLLLNRRQFP PSPSAPKIPS 240
  241 WQIPVKSSSP SSPAAVNHHS SSDISPVSNE STSSSPGKDS HSPEGSTATY HLLGPQEEGE 300
  301 GVLDVKGQVR MEVQGEEEKR EDKEDEDDED DDVSHVDEED VLGVQREDRR GGDGQINEQV 360
  361 EKLRRPEGAS NETERD

Type	Start	End	Confidence
Cytoplasmic	1	108	0.79
Transmembrane Helix	109	127	0.80
Non-Cytoplasmic	128	376	0.96