YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14030458
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSQSWARR CFKAFCKGFF VAVPVAVTFL DRVACVARVE GSSMQPSLNP GGSQSSDVVL  60
   61 LNHWKVRNFE VQRGDIVSLV SPKNPEQKII KRVIALEGDI VRTIGHKNGL VKVPRGHMWV 120
  121 EGDHHGHSFD SNSFGPVSLG LLHAHATHIL WPPERWQRLE SVLPPERCPL QTGEK

Type	Start	End	Confidence
Signal Peptide	1	35	0.61
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	175	0.97