YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	S35G1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	72	0.98
Transmembrane Helix	73	92	0.94
Non-Cytoplasmic	93	102	0.76
Transmembrane Helix	103	121	0.96
Cytoplasmic	122	134	0.86
Transmembrane Helix	135	154	0.96
Non-Cytoplasmic	155	161	0.77
Transmembrane Helix	162	181	0.96
Cytoplasmic	182	189	0.81
Transmembrane Helix	190	209	0.95
Non-Cytoplasmic	210	226	0.89
Transmembrane Helix	227	245	0.95
Cytoplasmic	246	256	0.81
Transmembrane Helix	257	277	0.95
Non-Cytoplasmic	278	287	0.74
Transmembrane Helix	288	306	0.95
Cytoplasmic	307	316	0.78
Transmembrane Helix	317	336	0.94
Non-Cytoplasmic	337	341	0.87
Transmembrane Helix	342	364	0.88
Cytoplasmic	365	368	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPESAAEL AAEAVELREP ELQLADPASP GEEHVDVEAE GAPGRGRCWP CGAWACGSRG  60
   61 EPEAKKKAPC PGLGLFYTVL SAFLFSVASL FVKKVQGVHA VEISAFRCVV QMLVIIPCLI 120
  121 YRKTGFIGPK GQRLFLFLRG VFGSSAMILM YYAFQTTSLA DATVIAFSCP VFTSIFAWIF 180
  181 LKEKYSLWDA FFTLFAIAGV ILIVRPPFIF GSDTSGMRES YSEHIKGTFA AIGHAVLAAI 240
  241 TLVILRKMGK SVDYFLSIWY YVILGLPEAI IILFVIGEWS LPYCGLDRLF LILIGLLGLG 300
  301 GQIFITKAVQ IEKAGLVAIM KTMDIVFAFI FQIAFFDNVP TWWTVGGALC VVVSTTGATI 360
  361 RRWLQGSK