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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HA17_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTMLLLLV AAALTLIETR AGQHSLQYFH TAVSRPGLGE PWFISVGYVD DTQFVRFDSD  60
   61 AENPRMEPRA RWMEQEGPEY WERETQIAKG HEQSFRGSLR TAQSYYNQSK GGSHTLQWMY 120
  121 GCDMGSDGRL LRGYLQFAYE GRDYIALNED LKTWTAVDMA AQITRRKWEQ AGIAEKDQAY 180
  181 LEGTCMQSLR RYLQLGKETL LRTDPPKAHV THHPRSYGAV TLRCWALGFY PADITLTWQL 240
  241 NGEELTQDME LVETRPAGDG TFQKWASVVV PLGKEQNYTC HVNHEGLPEP LTLRWGRWEP 300
  301 PPYTVSNMAT IAVVVDLGAV AIIGAVVAFV MNRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle