YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EPGN_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.89
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGVLIAVC LLFKAMKAAL SEEAEVIPPS TAQQSNWTFN NTEADYIEEP VALKFSHPCL  60
   61 EDHNSYCING ACAFHHELKQ AICRCFTGYT GQRCEHLTLT SYAVDSYEKY IAIGIGVGLL 120
  121 ISAFLAVFYC YIRKRCINLK SPYIICSGGS PL

Type	Start	End	Confidence
Signal Peptide	1	18	0.96
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	109	0.98
Transmembrane Helix	110	132	0.88
Cytoplasmic	133	152	0.92