YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CD69_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSENCSITE NSSSHLERGQ KDHGTSIHFE KHHEGSIQVS IPWAVLIVVL ITSLIIALIA  60
   61 LNVGKYNCPG LYEKLESSDH HVATCKNEWI SYKRTCYFFS TTTKSWALAQ RSCSEDAATL 120
  121 AVIDSEKDMT FLKRYSGELE HWIGLKNEAN QTWKWANGKE FNSWFNLTGS GRCVSVNHKN 180
  181 VTAVDCEANF HWVCSKPSR

Type	Start	End	Confidence
Cytoplasmic	1	38	0.52
Transmembrane Helix	39	61	0.87
Non-Cytoplasmic	62	199	0.54