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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7209719
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWKILPVCL SLLLPVVLIQ QVSSQDLSSC AGRCGEGYSR DATCNCDYNC QHYMECCPDF  60
   61 KRVCSPELSC KGRCFESFAR GRECDCDSQC KQYGKCCADY DSFCEEVHNS TSPSSKTAPT 120
  121 PAGASDTIKS TTKRSPKSPT TRTIKVVESE ELTEEHSDSE NQESSSSSSS SSSTIRKIKS 180
  181 SKNSANRELQ KNPNVKDNKK NTPKKKPNPE PPAVDEAGSG LDNGEFKLTP PPPDPPTTPH 240
  241 SKVATSPKTT AAKPVTPKPS LAPNSETSKE ASLASNKETT VETKETTATN KQSSASKKKT 300
  301 TSVKETRSAE KTSDKDVEPT STTPKNSAPT TTKKPVTTTK ESKFLPLPQE PEPTTAKEPP 360
  361 PTTKKPEPTT RKEPEPTTPK EPEPTTPKEP EPTTPKEPEP TTPKEPPPTT KKPEPTTPKE 420
  421 PGPTTPKEPE PTTTKEPEPT TTKEPESTTR KEPEPTTPKE PEPTTPKEPE PTTLKEPEPT 480
  481 TPKEPEPTTP KEPEPTTPKE PEPTTPKEPE PTTPKEPEPT TPKEPEPTTP KEPEPTTPKE 540
  541 PEPTTPKKPE PTTPKEPVPT TPKEPEPTTP KEPEPTTPKE PEPTTRKEPE PTTPKEPEPT 600
  601 TPKEPEPTTP KKPEPTTTSP KTTTLKATTL APKVTAPAEE IQNKPEETTP ASEDSDDSKT 660
  661 TLKPQKPTKA PKPTKKPTKA PKKPTSTKKP KTPKTRKPKT TPAPLKTTSA TPELNTTPLE 720
  721 VMLPTTTIPK QTPNPETAEV NPDHEDADGG EGEKPLIPGP PVLFPTAIPG TDLLAGRLNR 780
  781 GININPMPSD ETNLCNGKPV DGLTTLRNGT LVAFRGHYFW MLNPFRPPSP PRRITEVWGI 840
  841 PSPIDTVFTR CNCEGKTFFF KDSQYWRFTN DVVDPGYPKQ IVKGFGGLTG KIVAALSIAK 900
  901 YKDRPESVYF FKRGGNIQQY TYKQEPMKKC TGRRPAINYS VYGEAAQVRR RRFERAVGPF 960
  961 QTHTFRIHYS VPMRVSYQDK GFLHNEVKVS TMWRGFPNVV TSAITLPNIR KPDGYDYYAF1020
 1021 SKDQYYNIDV PTRTARAITT RSGQTLSKIW YNCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle