YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGES2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQAARLSWV LVSSRCALTE GLLTRPWQPL SAQSRAGFTR VAAGSRGAAV RKGSPRLLGA  60
   61 AALALGGALG LYHTVRWHQR SQDLRAERSA AQLPLSNSLQ LTLYQYKTCP FCSKVRAFLD 120
  121 FHSLPYQVVE VNPVRRTEIK FSSYRKVPIL VAQEGDSLQQ LNDSSVIISA LKTYLVSGQP 180
  181 LEEVITYYPP MKAMNDQGKE VTEFCNKYWL MLDEKEAQQM YGGKEARTEE MKWRQWADDW 240
  241 LVHLISPNVY RTPAEALASF DYIVREGKFG AVEAAMAKYV GAAAMYLISK RLKSRHHLQD 300
  301 DVRVDLYEAA NKWVTAVGKD RPFMGGQKPN LADLAVYGVL RVMEGLEAFD DLMRHSHIQP 360
  361 WYLRMERAIE EAPSVHHVNP SCKD

Type	Start	End	Confidence
Cytoplasmic	1	54	0.61
Transmembrane Helix	55	75	0.60
Non-Cytoplasmic	76	384	0.98