YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TX261_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFMYVLSWL SLFIQVAFIT LAVAAGLYYL AELIEEYTVA TSRIIKYMIW FSTAVLIGLY  60
   61 VFERFPTSMI GVGLFTNLVY FGLLQTFPFI MLTSPNFILS CGLVVVNHYL AFQFFAEEYY 120
  121 PFSEVLAYFT FCLWIIPFAF FVSLSAGENV LPSTMQPGDD VVSNYFTKGK RGKRLGILVV 180
  181 FSFIKEAILP SRQKIY

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.68
Transmembrane Helix	9	31	0.91
Cytoplasmic	32	43	0.70
Transmembrane Helix	44	62	0.89
Non-Cytoplasmic	63	68	0.52
Transmembrane Helix	69	87	0.64
Cytoplasmic	88	88	0.24
Transmembrane Helix	89	116	0.71
Non-Cytoplasmic	117	124	0.51
Transmembrane Helix	125	147	0.89
Cytoplasmic	148	196	0.54