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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TLR5_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACQLDLLIG VIFMASPVLV ISPCSSDGRI AFFRGCNLTQ IPWILNTTTE RLLLSFNYIS  60
   61 MVVATSFPLL ERLQLLELGT QYANLTIGPG AFRNLPNLRI LDLGQSQIEV LNRDAFQGLP 120
  121 HLLELRLFSC GLSSAVLSDG YFRNLYSLAR LDLSGNQIHS LRLHSSFREL NSLSDVNFAF 180
  181 NQIFTICEDE LEPLQGKTLS FFGLKLTKLF SRVSVGWETC RNPFRGVRLE TLDLSENGWT 240
  241 VDITRNFSNI IQGSQISSLI LKHHIMGPGF GFQNIRDPDQ STFASLARSS VLQLDLSHGF 300
  301 IFSLNPRLFG TLKDLKMLNL AFNKINKIGE NAFYGLDSLQ VLNLSYNLLG ELYNSNFYGL 360
  361 PRVAYVDLQR NHIGIIQDQT FRLLKTLQTL DLRDNALKAI GFIPSIQMVL LGGNKLVHLP 420
  421 HIHFTANFLE LSENRLENLS DLYFLLRVPQ LQFLILNQNR LSSCKAAHTP SENPSLEQLF 480
  481 LTENMLQLAW ETGLCWDVFQ GLSRLQILYL SNNYLNFLPP GIFNDLVALR MLSLSANKLT 540
  541 VLSPGSLPAN LEILDISRNQ LLCPDPALFS SLRVLDITHN EFVCNCELST FISWLNQTNV 600
  601 TLFGSPADVY CMYPNSLLGG SLYNISTEDC DEEEAMRSLK FSLFILCTVT LTLFLVITLV 660
  661 VIKFRGICFL CYKTIQKLVF KDKVWSLEPG AYRYDAYFCF SSKDFEWAQN ALLKHLDAHY 720
  721 SSRNRLRLCF EERDFIPGEN HISNIQAAVW GSRKTVCLVS RHFLKDGWCL EAFRYAQSRS 780
  781 LSDLKSILIV VVVGSLSQYQ LMRHETIRGF LQKQQYLRWP EDLQDVGWFL DKLSGCILKE 840
  841 EKGKKRSSSI QLRTIATIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle