YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NINJ2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESDRETIHL QHRHSMRGGN QRIDLNFYAT KKSVAESMLD VALFMSNAMR LKSVLQQGPF  60
   61 AEYYTTLVTL IIVSLLLQVV ISLLLVFIAI LNLNEVENQR HLNKLNNAAT ILVFITVVIN 120
  121 IFITAFGAHH AASMAARTSS NPI

Type	Start	End	Confidence
Cytoplasmic	1	65	0.51
Transmembrane Helix	66	91	0.88
Non-Cytoplasmic	92	107	0.44
Transmembrane Helix	108	132	0.86
Cytoplasmic	133	143	0.46