YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TA2R4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWELYVFVF AASVFLNFVG IIANLFIIVI IIKTWVNSRR IASPDRILFS LAITRFLTLG  60
   61 LFLLNSVYIA TNTGRSVYFS TFFLLCWKFL DANSLWLVTI LNSLYCVKIT NFQHPVFLLL 120
  121 KRTISMKTTS LLLACLLISA LTTLLYYMLS QISRFPEHII GRNDTSFDLS DGILTLVASL 180
  181 VLNSLLQFML NVTFASLLIH SLRRHIQKMQ RNRTSFWNPQ TEAHMGAMRL MICFLVLYIP 240
  241 YSIATLLYLP SYMRKNLRAQ AICMIITAAY PPGHSVLLII THHKLKAKAK KIFCFYK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.93
Transmembrane Helix	8	32	0.88
Cytoplasmic	33	50	0.82
Transmembrane Helix	51	71	0.92
Non-Cytoplasmic	72	88	0.83
Transmembrane Helix	89	109	0.83
Cytoplasmic	110	127	0.86
Transmembrane Helix	128	149	0.92
Non-Cytoplasmic	150	175	0.94
Transmembrane Helix	176	202	0.80
Cytoplasmic	203	226	0.91
Transmembrane Helix	227	249	0.86
Non-Cytoplasmic	250	258	0.83
Transmembrane Helix	259	281	0.89
Cytoplasmic	282	297	0.93