YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLPR2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGRPHLKR SFSIIPCFVF VESVLLGIVV LLAYRLEFTD TFPVHTQGFF CYDSAYAKPY  60
   61 PGPEAASRAP PALIYALVTA GPTLTILLGE LARAFFPAPP SSSPVSGEST IVSGACCRFS 120
  121 PPLRRLVRFL GVYSFGLFTT TIFANAGQVV TGNPTPHFLS VCRPNYTALG CPPPSPDRPG 180
  181 PDRFVTDQSA CAGSPSLVAA ARRAFPCKDA ALCAYAVTYT AMYVTLVFRV KGSRLVKPSL 240
  241 CLALLCPAFL VGVVRVAEYR NHWSDVLAGF LTGAAIATFL VTCVVHNFQS RPHSGRRLSP 300
  301 WEDLSQAPTM DSPLEKNPRP AGRIRHRHGS PHPSRRTVPA VAT

Type	Start	End	Confidence
Cytoplasmic	1	11	0.96
Transmembrane Helix	12	34	0.93
Non-Cytoplasmic	35	71	0.92
Transmembrane Helix	72	92	0.89
Cytoplasmic	93	128	0.92
Transmembrane Helix	129	149	0.88
Non-Cytoplasmic	150	209	0.90
Transmembrane Helix	210	228	0.85
Cytoplasmic	229	238	0.72
Transmembrane Helix	239	257	0.94
Non-Cytoplasmic	258	265	0.82
Transmembrane Helix	266	288	0.93
Cytoplasmic	289	343	0.96