YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SFT2B_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLKKVLSG QDTEDRSGLS EVVEASSLSW GTRIKGFIAC FALGILCSVL GTLLLWVPRK  60
   61 GLGLFAVFYT LGNIMSIGST VFLMGPLKQL KRMFEPTRLI ATILVLLCFA LTLCSAFLWN 120
  121 KGLALIFCIL QSLALTWYSL SYIPYARDAV KKCFAVCLA

Type	Start	End	Confidence
Cytoplasmic	1	35	0.98
Transmembrane Helix	36	57	0.94
Non-Cytoplasmic	58	64	0.81
Transmembrane Helix	65	85	0.95
Cytoplasmic	86	98	0.81
Transmembrane Helix	99	119	0.92
Non-Cytoplasmic	120	122	0.86
Transmembrane Helix	123	142	0.89
Cytoplasmic	143	159	0.85