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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21450327, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSSYRVVF EKGGVYLHTS ARKHQDPDSL IAGVIRVVEK DSDVFLHWAP VEEAGDPTQI  60
   61 LFKKDPSRGE PSTSEEEPTF DPGYEPDWAV ISTVRPQPHL AEPRKGAEPS SSRSSWAFSV 120
  121 SLGELKSIRR SKPGLSWAYL VLVTQAGGSL PALHFHRGGT RALLRVLSRY LLLASSPQDS 180
  181 RLYLVFPQDP SALSDSFHHL QLFDQDSSNV VSRFLQDPYS TTFSSFSRVT NFFRGALQPH 240
  241 PEGASSPNLP PLPDDEPEPG FEVISCVELG QRPTVERAPP VTEEEWNRYV GPEGRLQNVP 300
  301 ELKNRIFSGG LSPGLRREAW KFLLGYLSWE SSAEEHKAHV RKKTDEYFRM KLQWKSVSAE 360
  361 QERRNSLLHG YRSLIERDVS RTDRTNKFYE GPENPGLSLL HDILLTYCMY HFDLGYVQGM 420
  421 SDLLSPILFV VQNEVDAFWC FCGFMELVHG NFEESQETMK RQLGQLLLLL RVLDQPLCDF 480
  481 LDSQDSGSLC FCFRWLLIWF KREFPFPDVL RLWEVGGQLG CCGQGFLAPI CTCWWPVPSW 540
  541 IWNGTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle