YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GGT1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRFLVLGL VAVVLVFVII GLCIWLPYTS GKPDHVYSRA AVATDAKRCS EIGRDILQEG  60
   61 GSVVDAAIAS LLCMGLMNAH SMGIGGGLFF TIYNSTTGKV EVINAREVAP RLANTTMFNN 120
  121 SKDSEEGGLS VAVPGEIRGY ELAHQRHGRL PWARLFQPSI QLARHGFPVG KGLAIALDKK 180
  181 RDVIEKTPAL CEVFCRQGKV LQEGETVTMP KLADTLQILA QEGAKAFYNG SLTAQIVKDI 240
  241 QEAGGIMTVE DLNNYRAELI EHPMSIGLGD ATLYVPSAPL SGPVLILILN ILKGYNFSPK 300
  301 SVATPEQKAL TYHRIVEAFR FAYAKRTMLG DPKFVDVSQV IRNMSSEFYA TQLRARITDE 360
  361 TTHPAAYYEP EFYLQDDGGT AHLSAVSEDG SAVAATSTIN LYFGSKVLSR VSGILFNDEM 420
  421 DDFSSPNFIN QFRVAPSPAN FIKPGKQPLS SMCPSIILDK DGQVRMVVGA SGGTQITTSV 480
  481 ALAIINSLWF GYDVKRAVEE PRLHNQLLPN TTTVEKDIDQ VVTAGLKIRH HHTEVTPTFI 540
  541 AVVQAVVRAS GGWAAASDSR KGGEPAGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle