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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30520015, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVGAAGGS EAGGGVRVGA SAPPGCFRAW PAAAAAHRCS WAALCRLGGG RAATRGRSQG  60
   61 WKNVMTFESF TYVVPDIHPH LSIINQVKLY STNVQKGGQG SQTPKADKVP SLTQTVENIG 120
  121 AELKAPLKQD PLQVRVKAVL KKRDYGSKYT KNNFITGVRA INEFCLKSSD LEQLRKIRRR 180
  181 SPHDDTESFT VFLRSDVEAK ALEVWGSLEA LAREKKLRKE AEIEYRERLF RNQRILREYG 240
  241 DFLGNTKPRS RAVSVFLKGP GKVVMVAICI NGLNCFFKFL AWIYTGSASM FSEAIHSLSD 300
  301 TCNQGLLALG ISKSVQTPDP SHPYGFSNMR YISSLISGVG IFMMGAGLSW YHGIMGLLHP 360
  361 QPMESLLWAY CILAGSLVSE GATLLVAINE LRRSAQAKGT TFYKYVMESR DPSTNVILLE 420
  421 DTAAVLGVII AATCMGLTSI TGNPLYDSLG SLGVGTLLGV VSAFLIYTNT EALLGRSIQP 480
  481 EQVQRLTELL ESDPSVRAIH DVKATDLGLG KVRFKAEVDF DGRVVTRSYL EKQDFDQMMQ 540
  541 EIQEVKTPEQ LEAFMLKHGE NIIDTLGAEV DRLEKELKKR NPEVRHVDLE IL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle