YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18044661
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSGALFPS LVPGSRGSST KYLVEFRAGK MSLKGTTVTP DKRKGLVYIQ QTDDSLIHFC  60
   61 WKDRTSGTVE DDLIIFPDDC EFKRVPQCPS GRVYVLKFKA GSKRLFFWMQ VDLGPSLGQA 120
  121 WPACWGAVDL QPAALHPAAS ATSPSPAPSS GNGTSTAASP TQPIQLSDLQ SILATMNVPA 180
  181 GPGGSQQVDL ASVLTPEIMA PILANADVQE RLLPYLPSGE SLPQTADEIQ NTLTSPQFQQ 240
  241 ALGMFSAALA SGQLGPLMCQ FGLPAEAVEA ANKGDVEAFA KAMQNNAKSD PKEGDTKDKK 300
  301 DEEEDMSLD

Type	Start	End	Confidence
Signal Peptide	1	17	0.87
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	309	0.97