YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119116865
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRVLLRTF CVILGLEADS PRSIKAPIAT AERFFQKLRN KHEFTILVTL KQIHLNSGVI  60
   61 LSIHHLDHRY LELESSGHRN EIRLHYRSGT HRPHTEVFPY ILADAKWHKL SLAFSASHLI 120
  121 LHIDCNKIYE RVVEMPSTDL PLGTTFWLGQ RNNAHGYFKG IMQDVQLLVM PQGFIAQCPD 180
  181 LNRTCPTCND FHGLVQKIME LQDILSKTSA KLSRAEQRMN RLDQCYCERT CTMKGTTYRE 240
  241 FESWTDGCKN CTCLNGTIQC ETLVCPAPDC PAKSAPAYVD GKCCKECKST CQFQGRSYFE 300
  301 GERSTVFSAS GMCVLYECKD QTMKLVENAG CPALDCPESH QIALSHSCCK VCKGYDFCSE 360
  361 KHTCMENSVC RNLNDRAVCS CRDGFRALRE DNAYCEDIDE CAEGRHYCRE NTMCVNTPGS 420
  421 FLCICQTGYI RIDDYSCTEH DECLTNQHNC DENALCFNTV GGHNCVCKPG YTGNGTTCKA 480
  481 FCKDGCRNGG ACIAANVCAC PQGFTGPSCE TDIDECSEGF VQCDSRANCI NLPGWYHCEC 540
  541 RDGYHDNGMF APGGESCEDI DECGTGRHSC ANDTICFNLD GGYDCRCPHG KNCTGDCVHD 600
  601 GKVKHNGQIW VLENDRCSVC SCQTGFVMCR RMVCDCENPT VDLSCCPECD PRLSSQCLHQ 660
  661 NGETVYNSGD TWVQDCRQCR CLQGEVDCWP LACPEVECEF SVLPENECCP RCVTDPCQAD 720
  721 TIRNDITKTC LDEMNVVRFT GSSWIKHGTE CTLCQCKNGH VCCSVDPQCL QEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle