YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX12_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEYGAHITT ASVADDQPSI FEVVAQDSLM TAVRPALQHV VKVLAESNPA HYGFLWRWFD  60
   61 EIFTLLDFLL QQHYLSRTSA SFSEHFYGLK RIVAGSSPHL QRPASAGLPK EHLWKSAMFL 120
  121 VLLPYLKVKL EKLASSLREE DEYSIHPPSS RWKRFYRAFL AAYPFVNMAW EGWFLTQQLR 180
  181 YILGKAEHHS PLLKLAGVRL ARLTAQDMQA IKQRLVEASA MQEPVRSVGE KIKSALKKAV 240
  241 GGVALSLSTG LSVGVFFLQF LDWWYSSENQ EAIKSLTALP TPPPPVHLDY NSDSPLLPKM 300
  301 KTVCPLCRKT RVNDTVLATS GYVFCYRCVF NYVRSHQACP ITGYPTEVQH LIKLYSPEN

Type	Start	End	Confidence
Cytoplasmic	1	238	0.65
Transmembrane Helix	239	261	0.65
Non-Cytoplasmic	262	359	0.85