YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PE2R2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNFLNDSKL MEDCKSRQWL LSGESPAISS VMFSAGVLGN LIALALLARR WRGDTGCSAG  60
   61 SRTSISLFHV LVTELVLTDL LGTCLISPVV LASYSRNQTL VALAPESHAC TYFAFTMTFF 120
  121 SLATMLMLFA MALERYLSIG YPYFYRRHLS RRGGLAVLPV IYGASLLFCS LPLLNYGEYV 180
  181 QYCPGTWCFI RHGRTAYLQL YATMLLLLIV AVLACNISVI LNLIRMHRRS RRSRCGLSGS 240
  241 SLRGPGSRRR GERTSMAEET DHLILLAIMT ITFAICSLPF TIFAYMDETS SLKEKWDLRA 300
  301 LRFLSVNSII DPWVFAILRP PVLRLMRSVL CCRTSLRTQE AQQTSCSTQS SASKQTDLCG 360
  361 QL

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.96
Transmembrane Helix	27	48	0.93
Cytoplasmic	49	66	0.90
Transmembrane Helix	67	91	0.87
Non-Cytoplasmic	92	110	0.91
Transmembrane Helix	111	133	0.91
Cytoplasmic	134	152	0.93
Transmembrane Helix	153	174	0.93
Non-Cytoplasmic	175	201	0.90
Transmembrane Helix	202	224	0.94
Cytoplasmic	225	262	0.97
Transmembrane Helix	263	284	0.95
Non-Cytoplasmic	285	299	0.91
Transmembrane Helix	300	318	0.67
Cytoplasmic	319	362	0.70