YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40616
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRNLILITL LVASGHGQTP VIGGTCKLGT ADVQIGGKQT QFFLKCETTA DSAEGEGVWV  60
   61 VKSRAAAAPS SVPSVPAENT QPQQHPKARK PASPNICEQD NGARESEVCA VSATCLQAHN 120
  121 DFPSSYLQCD QTTLRWVRKS CQENFLFNFE QQTCIVPKRM SSLSPSTSSP SNTENPCSKC 180
  181 PLGSACRNGN CIPLTTSNLC SDGSPPNNTC TRDPYSCPKG HFCTAQKVCC PSTALQSSIG 240
  241 CSTVCTIDES CPKGMTCQNN CCEERKLLRH PKVYRYATVE ATNTIFEVDN DIFDSAAIES 300
  301 LPTQKPQRLD EIMAPGITPT PTRTTEPPKL RCLSSNTDEV NSLGGASSSS ATCGGTNANC 360
  361 TSDEDCPTTF KCYQGCCKLA VCPRSLTAVK FTCKTQYHCR ANEHCFFGGC CPKTIELAVI 420
  421 KSQVLTMSKD NEHTKETEKL IIGDCEVDTR VKKCDIDIIC PEMSECVDGI CCKQPPKARC 480
  481 GNGLMALSIP VHCSLSDDCP IASRCEYGKC CPFLSESADS TSDSVGETTP VIIKEEIIST 540
  541 ATKVWKKVDK TSGVSINKNK CLSTQRCDLH TLCPPDFTCS LSGKCCKLNI HCPDGTVPET 600
  601 SCQSASNHDH CPSSSHKCTL LNKEHFACCY SPGLVVEGSV TAEVSSECPI GSVEVDPRFG 660
  661 TSCRYSLQCP SPYFCNQRGQ QASGLVCTFS SCSNSNPCSV GTCNNGYCCS SGSNSGSAII 720
  721 DSDTNSTTNP SQPETTKTKN NTKKSNSSKK HRKPKKKDVD PLSDPLLQND FPIGPPGYGF 780
  781 PEHLSNLDEV LIRAQGDGEC PAGLHCDTAI NLCCPLLLPL TDPKNPKKRK TERRKQKQDG 840
  841 NEMEASANFP DSDPARFSSY SCGCMGGGSS NCVGCQNAPQ IITIPQNSCP GGGYSVGGCS 900
  901 SGYCATGYSC IQNQCCPSYN SAPRISVYTC PSGGNAVGAC MSGRCASGYT CSNNVCCPQT 960
  961 TTTNPFVCPD GTQAAGGCVN GQCGTGYTCS NGLCCAGTST TVKCLDGSDA VGACIPSCTG1020
 1021 DGCGGVQVSY YCGSGYTCTT GNICCPINSC PNGGEVLGPT INGLCPTGYT VQGNLCCSAT1080
 1081 CTDGSTGLPS VNGVCIDGYS LTNGVCCPAS VTCTDEISIG PCTGTGFNGG CPAGYACDSN1140
 1141 QVNCCPVVRY TDESCQVGPA IDGLCPPGYV VVYIPNSPLI TNGVNPGTCI DLQCTTGLCL1200
 1201 TANQIGDCDT ATDAGTCPTG YTCFTNAGIC CSTTTFSRLR IGNSRQMAQK PNYGRPLHSY1260
 1261 MPPRFGGPSS SCSDGSLSSG PCMNGLCGIG LECQNGKCCS PSSNKPAGLL QSKCPSGDTA1320
 1321 VSGCFPNGSC GTGYECVSSL NLCCPPGQPQ TFPSFPGNNN GFNINNNNRF GSLSMSPRPI1380
 1381 GARCQLDGEC VGQAEGLSMC HAGVCQCSPI AYTQGIACVR RKSFQMNDDP VIDAANDDKS1440
 1441 SSSVSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle