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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40629
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKKVKEKL SCLSTNILLL IVVIAIFGTV VIWKIDKLEL WEAEALSSQE SMLGELKVAV  60
   61 TSLEQHRPGH LKKNVCQTPE CITLAHQLHN YHDPSADPCD NFYQSVCGKQ HEHSLKSGLA 120
  121 KKHLILRNLI RETITNRKVT PTSKSENEMR KFHGICSKYQ RANSSSDIAQ QALRDIFRDV 180
  181 QSIGSWPAGS RNWNESDFNL NEMLNNLVKL GQRNFGLFQI SFKYRDQLLI SAEEHRRNYS 240
  241 KLEPTILNIF ETNGLVPDRI QLLKDLEGFA SLEALLKNHY YLDNMDKMKP AVLDDLVPSV 300
  301 DFMGLVKAMI SPGKEHLMPK IELKTSVLNQ TLFNDENMNL EAIILDTPKR TLANYLIFNF 360
  361 IDSSLDHLVF ETTSQKGNTC EDKVITYLPR ASLRVFIRNY VDKENRDLIT QLAEKTRIAL 420
  421 HTLVQNSTWL KAESKQLALD KINAMGKMIG YPDFFEPPGT LDGMFKNLNL DSSDTYYTAL 480
  481 NKLERYFVEQ KMDYFAEETP LDPDLRVFEM NAYYYIPGNQ LNFLAPFFDD PMFDSTYPDY 540
  541 VNIAMSGNII GHEMGHAFGP HAILRTVRGR EVWMKPEELA EYESRAQCLA NQYSEYDDPD 600
  601 FGRVFDGGKV IDELVADNIG REVSWKMFKS LDLTNATRII GFEDYDIDQL YFRVGALTHC 660
  661 TPHAMRDLKG SIESSHPRKA FRVNGVYANL PEFARAFNCP TGSPMNPRKK CDMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle