YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118764087
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDIDMGKEY IIPSPGYRSV RDRSTIPGQH GDREEPRFRR TRSLECQDAL ETAARVEGLS  60
   61 LDISVHSHLQ ILDEEHTKGK YHHGLSALKP FRTTTKHQHP VDNAGLFSYM TFSWLSPLAQ 120
  121 VVHKKGELLM EDVWPLSKYE SSDVNCRRLE RLWQEELNEV GPDAASLRRV VWIFCRTRLI 180
  181 LSIVCLMITQ LAGFSGPNFQ DGCYFCGQNE RVKLGRISRQ ELR

Type	Start	End	Confidence
Cytoplasmic	1	173	0.80
Transmembrane Helix	174	194	0.74
Non-Cytoplasmic	195	223	0.97