YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	G6PC3_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLYRQGVW MAEALQQNSR SLEDLWLVAS HMGDPKAAVL LVFPVVFYIH RRTGIAVLWV  60
   61 AALSEWLNLV FKWILFGERP YWWIGQSGLF SEKPPEVQQF QSTCESGPGS PSGHAMVTSA 120
  121 VWWVIISSLA SFSQAYTGSK ILSAVLYLLY AVFLGCVGLS RIFILAHFPH QVVAGLLTGV 180
  181 LLGVFLKRSV PERRPLLFFF RFSMALLGAA LIFHAVLEKT GIDLSWSISL AKRWCSRSEW 240
  241 VRMDTAPFSS LNRDAGVLLG LGLAQYWKPG GWTLPRAPRT LCLALSSLAL HYISRFPLPT 300
  301 VPPLLFYSLF FLKYSIVPQV VMVLVPGFVH LLTAKPKRE

Type	Start	End	Confidence
Cytoplasmic	1	54	0.74
Transmembrane Helix	55	76	0.91
Non-Cytoplasmic	77	114	0.95
Transmembrane Helix	115	136	0.85
Cytoplasmic	137	143	0.79
Transmembrane Helix	144	164	0.92
Non-Cytoplasmic	165	169	0.72
Transmembrane Helix	170	190	0.86
Cytoplasmic	191	196	0.94
Transmembrane Helix	197	217	0.96
Non-Cytoplasmic	218	249	0.95
Transmembrane Helix	250	267	0.74
Cytoplasmic	268	276	0.64
Transmembrane Helix	277	295	0.74
Non-Cytoplasmic	296	310	0.76
Transmembrane Helix	311	334	0.84
Cytoplasmic	335	339	0.92