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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121583679, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVMFVFTCW WFVFIFHLLG RDVFAAKSKN FNVLYLIADD LRPTLGCYSD PVVKSPNIDQ  60
   61 LASLSVVFHN AYAQQAVCGP SRVSFLTSRR PDTTKLYDFN SYWRVHAGNY TTLPQYFKSN 120
  121 GYTTLSVGKV FHPGIASNHS DDYPYSWSVP PYHPPSFEYE KRKVCKDKDG TLHSNLLCPV 180
  181 NVSEMPLGTL PDMENTEEAI RLLRSMKGSQ KPFFLSVGFY KPHIPFRIPQ EYLKLYPIEN 240
  241 MTLAPDPDVP KKLPDVAYNP WTDIRKREDV QALNLSFPYG PIPKDFQLRI RQHYFASVSY 300
  301 VDAQVGKILQ TLDDVGLAKN TIVVLSSDHG WSLGEHGEWA KYSNFDVATR VPLMVYKAGV 360
  361 SSRRSRPGAK TFPFIDVFQD TREHFGKGKI VNSVVELLDV FPTLANLAGL PSVHHCPSPS 420
  421 FKMDLCTEGS NLANLIRNPK HLNREAYSFS QYPRPSDSIQ ENSDLPNLAD IRIMGYSIRS 480
  481 NDYRYTLWVG FDPLHCKPNM TEIHAGELYI LTEDPGQDNN LFDEFGHAAL LNKFGTMPSW 540
  541 TESLKQHMMY FSSGLKSKGL S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle