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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COIA1_MOUSE, CA1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPDPSRRLC LLLLLLLSCR LVPASADGNS LSPLNPLVWL WPPKTSDSLE GPVSKPQNSS  60
   61 PVQSTENPTT HVVPQDGLTE QQTTPASSEL PPEEEEEEDQ KAGQGGSPAT PAVPIPLVAP 120
  121 AASPDMKEEN VAGVGAKILN VAQGIRSFVQ LWDEDSTIGH SAGTEVPDSS IPTVLPSPAE 180
  181 LSSAPQGSKT TLWLSSAIPS SPDAQTTEAG TLAVPTQLPP FQSNLQAPLG RPSAPPDFPG 240
  241 RAFLSSSTDQ GSSWGNQEPP RQPQHLEGKG FLPMTARSSQ QHRHSDVHSD IHGHVPLLPL 300
  301 VTGPLVTASL SVHGLLSVPS SDPSGQLSQV AALPGFPGTW VSHVAPSSGT GLSNDSALAG 360
  361 NGSLTSTSRC LPLPPTLTLC SRLGIGHFWL PNHLHHTDSV EVEATVQAWG RFLHTNCHPF 420
  421 LAWFFCLLLA PSCGPGPPPP LPPCRQFCEA LEDECWNYLA GDRLPVVCAS LPSQEDGYCV 480
  481 FIGPAAENVA EEVGLLQLLG DPLPEKISQI DDPHVGPAYI FGPDSNSGQV AQYHFPKLFF 540
  541 RDFSLLFHVR PATEAAGVLF AITDAAQVVV SLGVKLSEVR DGQQNISLLY TEPGASQTQT 600
  601 GASFRLPAFV GQWTHFALSV DGGSVALYVD CEEFQRVPFA RASQGLELER GAGLFVGQAG 660
  661 TADPDKFQGM ISELKVRKTP RVSPVHCLDE EDDDEDRASG DFGSGFEESS KSHKEDTSLL 720
  721 PGLPQPPPVT SPPLAGGSTT EDPRTEETEE DAAVDSIGAE TLPGTGSSGA WDEAIQNPGR 780
  781 GLIKGGMKGQ KGEPGAQGPP GPAGPQGPAG PVVQSPNSQP VPGAQGPPGP QGPPGKDGTP 840
  841 GRDGEPGDPG EDGRPGDTGP QGFPGTPGDV GPKGEKGDPG IGPRGPPGPP GPPGPSFRQD 900
  901 KLTFIDMEGS GFSGDIESLR GPRGFPGPPG PPGVPGLPGE PGRFGINGSY APGPAGLPGV 960
  961 PGKEGPPGFP GPPGPPGPPG KEGPPGVAGQ KGSVGDVGIP GPKGSKGDLG PIGMPGKSGL1020
 1021 AGSPGPVGPP GPPGPPGPPG PGFAAGFDDM EGSGIPLWTT ARSSDGLQGP PGSPGLKGDP1080
 1081 GVAGLPGAKG EVGADGAQGI PGPPGREGAA GSPGPKGEKG MPGEKGNPGK DGVGRPGLPG1140
 1141 PPGPPGPVIY VSSEDKAIVS TPGPEGKPGY AGFPGPAGPK GDLGSKGEQG LPGPKGEKGE1200
 1201 PGTIFSPDGR ALGHPQKGAK GEPGFRGPPG PYGRPGHKGE IGFPGRPGRP GTNGLKGEKG1260
 1261 EPGDASLGFS MRGLPGPPGP PGPPGPPGMP IYDSNAFVES GRPGLPGQQG VQGPSGPKGD1320
 1321 KGEVGPPGPP GQFPIDLFHL EAEMKGDKGD RGDAGQKGER GEPGAPGGGF FSSSVPGPPG1380
 1381 PPGYPGIPGP KGESIRGPPG PPGRQGPPGI GYEGRQGPPG PPGPPGPPSF PGPHRQTVSV1440
 1441 PGPPGPPGPP GPPGAMGASA GQVRIWATYQ TMLDKIREVP EGWLIFVAER EELYVRVRNG1500
 1501 FRKVLLEART ALPRGTGNEV AALQPPLVQL HEGSPYTRRE YSYSTARPWR ADDILANPPR1560
 1561 LPDRQPYPGV PHHHSSYVHL PPARPTLSLA HTHQDFQPVL HLVALNTPLS GGMRGIRGAD1620
 1621 FQCFQQARAV GLSGTFRAFL SSRLQDLYSI VRRADRGSVP IVNLKDEVLS PSWDSLFSGS1680
 1681 QGQLQPGARI FSFDGRDVLR HPAWPQKSVW HGSDPSGRRL MESYCETWRT ETTGATGQAS1740
 1741 SLLSGRLLEQ KAASCHNSYI VLCIENSFMT SFSK

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