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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACHG_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGGQRPHLL LLLLAVCLGA QSRNQEERLL ADLMRNYDPH LRPAERDSDV VNVSLKLTLT  60
   61 NLISLNEREE ALTTNVWIEM QWCDYRLRWD PKDYEGLWIL RVPSTMVWRP DIVLENNVDG 120
  121 VFEVALYCNV LVSPDGCIYW LPPAIFRSSC SISVTYFPFD WQNCSLIFQS QTYSTSEINL 180
  181 QLSQEDGQAI EWIFIDPEAF TENGEWAIRH RPAKMLLDSV APAEEAGHQK VVFYLLIQRK 240
  241 PLFYVINIIA PCVLISSVAI LIYFLPAKAG GQKCTVATNV LLAQTVFLFL VAKKVPETSQ 300
  301 AVPLISKYLT FLMVVTILIV VNSVVVLNVS LRSPHTHSMA RGVRKLFLRL LPQLLRMHVR 360
  361 PLAPAAVQDA RFRLQNGSSS GWPIMAREEG DLCLPRSELL FRQRQRNGLV QAVLEKLENG 420
  421 PEVRQSQEFC GSLKQASPAI QACVDACNLM ARARRQQSHF DSGNEEWLLV GRVLDRVCFL 480
  481 AMLSLFICGT AGIFLMAHYN QVPDLPFPGD PRPYLPLPD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle