YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLTR2_MOUSE, CLT...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTGTPSSY SNRNCTIENF KKEFYPIIYL IIFFWGALGN GFSIYVFLQT CKKSTSVNVF  60
   61 MLNLATSDFL FISTLPFRAD YYFRGSNWIF GDLACRVMSY SLYVNMYTSI YFLTVLSVVR 120
  121 FQATVHPFRM FHVTSVRSAW ILCGIIWVFI MASSALLLVN GQEEKDNIIS CLELSPQKFK 180
  181 SLLIMNHIAV AVGFLLPFLT LTVCYLLIIR ILLKAEIPES GPRAAHRKAL TTIVIAMITF 240
  241 LLCFLPYHAL RTLHLVTWDK DSCGDVLHKA TVITLTMAAA NSCFNPFLYY FAGENFKARL 300
  301 RAIFSKVHL

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.89
Transmembrane Helix	27	48	0.94
Cytoplasmic	49	58	0.74
Transmembrane Helix	59	79	0.86
Non-Cytoplasmic	80	99	0.89
Transmembrane Helix	100	121	0.81
Cytoplasmic	122	137	0.77
Transmembrane Helix	138	159	0.89
Non-Cytoplasmic	160	187	0.94
Transmembrane Helix	188	209	0.94
Cytoplasmic	210	228	0.92
Transmembrane Helix	229	250	0.94
Non-Cytoplasmic	251	269	0.95
Transmembrane Helix	270	292	0.87
Cytoplasmic	293	309	0.92