YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRFR2_MOUSE, CRF...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	139	0.98
Transmembrane Helix	140	161	0.94
Cytoplasmic	162	169	0.92
Transmembrane Helix	170	189	0.94
Non-Cytoplasmic	190	209	0.84
Transmembrane Helix	210	234	0.73
Cytoplasmic	235	244	0.80
Transmembrane Helix	245	265	0.95
Non-Cytoplasmic	266	286	0.92
Transmembrane Helix	287	309	0.89
Cytoplasmic	310	327	0.93
Transmembrane Helix	328	348	0.92
Non-Cytoplasmic	349	365	0.80
Transmembrane Helix	366	386	0.87
Cytoplasmic	387	431	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTPGSLPSA QLLLCLFSLL PVLQVAQPGQ APQDQPLWTL LEQYCHRTTI GNFSGPYTYC  60
   61 NTTLDQIGTC WPQSAPGALV ERPCPEYFNG IKYNTTRNAY RECLENGTWA SRVNYSHCEP 120
  121 ILDDKQRKYD LHYRIALIVN YLGHCVSVVA LVAAFLLFLV LRSIRCLRNV IHWNLITTFI 180
  181 LRNIAWFLLQ LIDHEVHEGN EVWCRCITTI FNYFVVTNFF WMFVEGCYLH TAIVMTYSTE 240
  241 HLRKWLFLFI GWCIPCPIII AWAVGKLYYE NEQCWFGKEA GDLVDYIYQG PVMLVLLINF 300
  301 VFLFNIVRIL MTKLRASTTS ETIQYRKAVK ATLVLLPLLG ITYMLFFVNP GEDDLSQIVF 360
  361 IYFNSFLQSF QGFFVSVFYC FFNGEVRAAL RKRWHRWQDH HALRVPVARA MSIPTSPTRI 420
  421 SFHSIKQTAA V