YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLC2H_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAAKVETSS MGMLQRADLT AADCLQEGEM GKKIQGKCFR IISTVSPVKL YCCYGVIMVL  60
   61 TVAVIALSVA LSVRNKIPAM EDREPCYTAC PSGWIGFGSK CFYFSEDMGN WTFSQSSCVA 120
  121 SNSHLALFHS LEELNFLKRY KGTSDHWIGL HRASTQHPWI WTDNTEYSNL VLTRGGGECG 180
  181 FLSDNGISSG RSYTHRKWIC SKFVSSCKSR VGSVPRHV

Type	Start	End	Confidence
Cytoplasmic	1	49	0.80
Transmembrane Helix	50	71	0.90
Non-Cytoplasmic	72	218	0.78