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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27777691, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKKQVTVC GAAIFCVAVF SLYLMLDRVQ HDPARHQNGG NFPRSQISVL QNRIEQLEQL  60
   61 LEENHDIISR IKDSVLELTA NAEGPPALLP YHTANGSWAV LPEPRPSFFS VSPQDCQFAL 120
  121 GGRGQKPELQ MLTVSEDLPF DNVEGGVWRQ GFDISYSPND WDTEDLQVFV VPHSHNDPGW 180
  181 IKTFDKYYTE QTQHILNSMV SKLQEDPRRR FLWAEVSFFA KWWDNISAQK RAAVRRLVGN 240
  241 GQLEIATGGW VMPDEANSHY FALVDQLIEG HQWLERNLGA TPRSGWAVDP FGHSSTMPYL 300
  301 LRRANLTSML IQRVHYAIKK HFAATHSLEF MWRQMWDSDS STDIFCHMMP FYSYDVPHTC 360
  361 GPDPKICCQF DFKRLPGGRI NCPWKVPPRA ITEANVADRA ALLLDQYRKK SRLFRSNVLL 420
  421 VPLGDDFRYD KPQEWDAQFF NYQRLFDFLN SKPEFHVQAQ FGTLSEYFDA LYKRTGVEPG 480
  481 ARPPGFPVLS GDFFSYADRE DHYWTGYYTS RPFYKSLDRV LEAHLRGAEI LYSLALAHAR 540
  541 RSGLAGQYPL SDFALLTEAR RTLGLFQHHD AITGTAKEAV VVDYGVRLLR SLVSLKQVII 600
  601 NAAHYLVLGD QETYSFDPGT PFLQMDDSRV SHDALPERTV IRLDSSPRFV VVFNPLEQER 660
  661 LSVVSLLVNS PRVRVLSEEG QPLSVQISVH WSSATDMVPD VYQVSVPVRL PGLGLGVLQL 720
  721 QPDLDGPYTL QSSVRVYLNG VKLSVSRQSA FPVRVVDSGA SDFAISNRYM QVWFSGLTGL 780
  781 LKVKGQARGG GEGPEEGMGV RGLVDSCSCS HVPSCLSPDS QRFGCEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle