YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RELL2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQPDLEP PQHGLYMLFL LVLVFFLMGL VGFMICHVLK KKGYRCRTSR GSEPDDAQLQ  60
   61 PPEDDDVNED TVERIVRCII QNEANAEALK EMLGDSEGEG TVQLSSVDAT SSLQDGAPSH 120
  121 HHTVHLGSAA PCIHCSRSKR PPLVRQGRSK EGKSRPRPGE TTVFSVGRFR VTHIEKRYGL 180
  181 HEHRDGSPTD RSWGSGGGQE PGGSQAAGGG QPRTGTAAIE RLLPEPPPSQ AAATHSVQNG 240
  241 RLQDASLVPC TLEGTPGTSA ELNLGPRGRD PSPGLSSQEA NGQPTKLDTS GQQESLPPEA 300
  301 GGM

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.90
Transmembrane Helix	16	39	0.92
Cytoplasmic	40	303	0.95