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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SE1L1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.59
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVRVRLSLL LLCAVLLGSA AATSDDKTNQ DDSLDSKSSL PTDESVKDHT TTGKVVAGQI  60
   61 FVDSEEAEVE SLLQDEEDSS KTQEEEISFL ESPNPSSKTY EELKRVRKPV LTAIEGTAHG 120
  121 EPCHFPFLFL DKEYDECTSD GREDGRLWCA TTYDYKTDEK WGFCETEEDA AKRRQMQEAE 180
  181 MIYQAGMKIL NGSNRKSQKR EAYRYLQKAA GMNHTKALER VSYALLFGDY LTQNIQAAKE 240
  241 MFEKLTEEGS PKGQTGLGFL YASGLGVNSS QAKALVYYTF GALGGNLIAH MILGYRYWAG 300
  301 IGVLQSCESA LTHYRLVANH VASDISLTGG SVVQRIRLPD EVENPGMNSG MLEEDLIQYY 360
  361 QFLAEKGDVQ AQVGLGQLHL HGGRGVEQNH QRAFDYFNLA ANAGNSHAMA FLGKMYSEGS 420
  421 DIVPQSNETA LHYFKKAADM GNPVGQSGLG MAYLYGRGVQ VNYDLALKYF QKAAEQGWVD 480
  481 GQLQLGSMYY NGIGVKRDYK QALKYFNLAS QGGHILAFYN LAQMHASGTG VMRSCHTAVE 540
  541 LFKNVCERGR WSERLMTAYN SYKDEDYNAA VVQYLLLAEQ GYEVAQSNAA FILDQREATI 600
  601 VGENETYPRA LLHWNRAASQ GYTVARIKLG DYHFYGFGTD VDYETAFIHY RLASEQQHSA 660
  661 QAMFNLGYMH EKGLGIKQDI HLAKRFYDMA AEASPDAQVP VFLALCKLGV VYFLQYIREA 720
  721 NIRDLFTQLD MDQLLGPEWD LYLMTIIALL LGTVIAYRQR QHQDIPVPRP PGPRPAPPQQ 780
  781 EGPPEQQPPQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle